rs46559749 SNP Detail

Summary

• ID
  rs46559749
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122207707 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCCATTAA ACCATAGCCT
  TCATGCCATG AATTCTCCAG CCAATGTGGC AACGAGTAAA CAGCTGTTCT GCCAACCTCT
  TGGACGCAGA CTGCCTGCCT GCCCGCCTGC CTGCCCAGCT TACTAGCGGG GGATTGCCAC
  GACACCAAAT CCATGGCAGG AACCTCGAGG GGAATGTTCT GGAAAACACT GCAAGCCTTC
  Y
  TGCCATGGTC TGCCTCGGGA GCTGATATGC CTGGACCACT GATTTATTGT ACATTAACTT
  CAGGGGCTTC TCCGGCTCTC GTTCTTTCTG CAGCTGCGCA TGCTCAGGTT ATTTTCTGGT
  TGGGTCTCAT CGTCACAGCT GCGTGCCACT CTTGTTCCTT TTGTTTCTTG GTTAGGACTC
  TGCAGAGCTG AAACTTCAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss135741126	ENSMUSSNP7151904	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46559749					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122207707 () rs orientation: forward

Symbol	Name	Function Class
Rr584324	regulatory region 584324	within coordinates