rs46555417 SNP Detail

Summary

• ID
  rs46555417
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124036537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCCTTTTT TAAAATAGCC
  AGAAGCTGAA AAGAACCCAG ATGTCCCTCA ACAGAGGAAT GGATACAGAA AATGTGGTAC
  ATTTACACAA TGGAGTACTA CTCAGCAATT AAAAACAATG AATTCATGAA ATTCTTAGGC
  AAATGGATCG GGAGGATATC ATCCTGAGTG AGGTAACCCA AACACAAAAG ATCACACATG
  R
  TATGCACTCA CTGATAAGTG GATATTAGCC CAGAAGCTCA GAATACCCAA GATACAATTT
  GCAAAACACA TGAAACTCAA GAAGAAGAAA GACCAACATG TGGATGCTTC GATCCTTCTT
  AGGAGGAACA AAATACCCAT GGAAGGCATT ACAGAGACAA AGTTCAGAGC AGAGACTGAA
  GGAATGACCA TCAAGAGACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320926585	CHEV_3_123945806	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs46555417					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124036537 () rs orientation: forward

Symbol	Name	Function Class
Rr584580	regulatory region 584580	1011 bp distal