rs46546382 SNP Detail

Summary

• ID
  rs46546382
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17676181 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGTTCCAT GGTCCTCACA
  TTCCAATGCT CTTAACCTCA GTCACTTTCA AACATTTATG GGAGGACGTT TAGCACATCT
  ACACTGTGAA ACTTTCACCA TAGTTGACTT AACAAGCTTT TTCCAAGTAG GGGTGTTTGT
  TCTAGGGAAG AGAGAGACAC TGAACCCGTC AATAGCACCG TGTCAGAAAG AGCAGAGGAT
  G
  TAGCTCAGTT GACAAAGCGC ATGTCCAGCA TGCCTAAAAC CCTCTGCGCG GTTCCCAACA
  AAGCTTCCAA CGGGGCATGG TGCTGCACAC CGATATGCCA GCCCTGGAGG TGGAGGATGG
  AGGATCAGGG AGTTCACATT CATTCCTAAC TACATAGATA GCTGGAGGCT AGCTTGGCCT
  ACAGACACTT AAAACAAAAA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss133020179	ENSMUSSNP29868	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46546382					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17676181 () rs orientation: forward

Symbol	Name	Function Class
Rr399579	regulatory region 399579	434 bp downstream
Rr626829	regulatory region 626829	348 bp distal
Rr626830	regulatory region 626830	587 bp distal