rs46504587 SNP Detail

Summary

• ID
  rs46504587
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21986890 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CTGTTGTGTC CGGCCAGCAG ATCACAACAT GGGTTCTAGC
  CTGGAAAGTC ATTTTGGAAA CCTGGAAGAG AAGAGGGGCT AGGTGGCGAG ATAAAGAAAT
  R
  TAGCTAAGAC AGTCATTCTG ATCAAAGCTC AATTTTTACT GTTGCAACAC TCAGTTATGA
  AGGAAGGGGG AGGGGACCCG ATTCCCGCCG AATAATCTCG G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145985399	ENSMUSSNP3515068	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46504587					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21986890 () rs orientation: forward

Symbol	Name	Function Class
Gm31813	predicted gene, 31813	within coordinates
Rr367415	regulatory region 367415	1665 bp upstream
Rr574163	regulatory region 574163	408 bp distal
Rr574164	regulatory region 574164	116 bp proximal
Rr574165	regulatory region 574165	1874 bp proximal