rs46501188 SNP Detail

Summary

• ID
  rs46501188
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172599978 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTGC TAGAAGGAAT GAAATCCCAC
  G
  GGAAGTCCTG AGTTCCTGAT GCAGA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148322320	ENSMUSSNP758653	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
ss320620090	CHEV_2_172583686	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46501188					SNP	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172599978 () rs orientation: forward

Symbol	Name	Function Class
Gm74644	predicted gene, 74644	335 bp downstream
Rr571720	regulatory region 571720	991 bp distal
Rr571721	regulatory region 571721	348 bp distal
Rr571722	regulatory region 571722	35 bp proximal
Rr571723	regulatory region 571723	518 bp proximal