rs46500459 SNP Detail

Summary

• ID
  rs46500459
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:86982335 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGT TTTTTTTTAA TCTGGGAAGA
  M
  AGCTCTCCCC GGTGCTTCAC CAAGA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146926808	ENSMUSSNP4106430	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46500459					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:86982335 () rs orientation: forward

Symbol	Name	Function Class
Rr594860	regulatory region 594860	823 bp distal
Rr594861	regulatory region 594861	1252 bp proximal
Slc24a2	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	Intron