rs46487916 SNP Detail

Summary

• ID
  rs46487916
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172599502 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGG GCTGAGTCCC GAGAATCTGC
  C
  TCCTTCAGTG GTGACTTGGT CATCG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148322310	ENSMUSSNP7124164	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss320620082	CHEV_2_172583210	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46487916					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172599502 () rs orientation: forward

Symbol	Name	Function Class
Gm74644	predicted gene, 74644	811 bp downstream
Rr571720	regulatory region 571720	515 bp distal
Rr571721	regulatory region 571721	within coordinates
Rr571722	regulatory region 571722	511 bp proximal
Rr571723	regulatory region 571723	994 bp proximal