rs46486117 SNP Detail

Summary

• ID
  rs46486117
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:21568478 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTCT CCTGCCCTAG GCTGGCTTGC
  C
  TCTCTGCTCT GGACTGGGGA GGTTC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146831284	ENSMUSSNP3565780	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46486117					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:21568478 () rs orientation: forward

Symbol	Name	Function Class
D18Mit68	DNA segment, Chr 18, Massachusetts Institute of Technology 68	204 bp proximal
Rr393394	regulatory region 393394	150 bp downstream
Rr534684	regulatory region 534684	1677 bp proximal