rs46479802 SNP Detail

Summary

• ID
  rs46479802
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144925789 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCAGCAGG CAAAGAAGAC
  ATGGCTATCA AAGTGGGTAG CTGGATGATC ACATTCCATC CACACACAGA AAGCAGAGAA
  ACAGAACAGG GAGTTGGACC ACATTATCAA ACCTGAGAGC CAGTCTTTGA TGACTACTCT
  TAGCAAGGCT CTCTTATGGT TGTACACTTT CCTAAGACAG CACCACCTGG TGGGGACCAA
  R
  TGTTATAACA TATGAGCCTG TGGTGGACAC TTCACATTCA GCCCAGAGCA ATCTCCAGGT
  TTATCTTTCT TAAATGGACC AAGAGAAGAT TGGGGTTCAC TAGAGAGAGA AAGTATTTGT
  GGATTTATAA GGAATAAATA AAACAGTATT AGAGGACTGA TTGCTTTTTA AAGAATAGGC
  ATGTTCTTAA ATCAAATAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss136035840	ENSMUSSNP1198485	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs46479802					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144925789 () rs orientation: forward

Symbol	Name	Function Class
Rr586766	regulatory region 586766	3 bp distal