rs46478712 SNP Detail

Summary

• ID
  rs46478712
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:50234027 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A ATTAGTATGT GTTAGAGGAA TGTTGAAGTT AGGAACAGGA
  GATGCCCTCA AAGAAATGTT AGAGTTCACA AAGGGCAGTC GGATAGGGAG AAGGGCAACA
  A
  CCAGATAATA ATGGTGGCAA ACCTCCAATT TGACTAACTT CATCCTCACT CCCTTGATCT
  GATGCAAAGC TTAAAATGGA GGCCTTGTAG GCATTAGTCT C                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135156369	ENSMUSSNP2069184	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs46478712					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:50234027 () rs orientation: forward

Symbol	Name	Function Class
Rr576143	regulatory region 576143	721 bp distal