rs46478233 SNP Detail

Summary

• ID
  rs46478233
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151478170 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATATAGAA TAATGTTAAC
  TATGGGTATC TTAAGTATAC TAGTTTGAAA TATGCCCCTT GTGTTCCAAA TGTTACAGTG
  AGCTTCATCA AGGAACATTT CTGATTCATT AGAATATTCA CATGATTTCA TAGGATATTA
  TCCTACACTC TAAAGATATT AAAGATTTCA CTAAGATCTG ATAAAGACGT TCAACAAATA
  K
  AAATGGGGCT TAGTTTGAAG CTCACCAAGC TTCAAAAATA TAACTAGAGA CAGACCTACA
  AGGGGGGGAA AGCTCACTAC TATGAAAACT TTAAAACATT GAGGAAGAAA CTGGATGGTC
  TCAGGTTCAG GGGTGGGGCT TGGGGGAGGG TAGAGTTAAT ATTAAGGAAA GGACTGTATT
  ACCAAGAAAG ATCTGGGGCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss136098047	ENSMUSSNP1409394	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46478233					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151478170 () rs orientation: forward

Symbol	Name	Function Class
Rr587415	regulatory region 587415	1474 bp distal
Rr587416	regulatory region 587416	1147 bp distal
Rr587417	regulatory region 587417	1216 bp distal