rs46476210 SNP Detail

Summary

• ID
  rs46476210
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145192220 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATTAATAAA AGATATAGAC ATATTAAACT CAGCAGGGAA
  GATGGACAAA ATGAGGCTAT TGAACATTTT GATGCAGTTG AGGAAATGCT GCAATCATCC
  G
  TATCTCTTCG ATGGAGCTGA ACCTGGTCCA CTGTTCACAA CAGATATGCA TCTAGTTACC
  AACAGTGGCA AGATGGTGGT GTTAGACAAG CTACTCCCT                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147859583	ENSMUSSNP4776845	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46476210					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145192220 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15270	CpG island 15270	1367 bp distal
Gm65281	predicted gene, 65281	163 bp downstream
Gm70672	predicted gene, 70672	1189 bp upstream
Rr377358	regulatory region 377358	863 bp downstream
Rr604377	regulatory region 604377	1436 bp distal
Rr604378	regulatory region 604378	1249 bp distal
Smarca5-ps	SNF2 related chromatin remodeling ATPase 5, pseudogene	within coordinates