rs46460631 SNP Detail

Summary

• ID
  rs46460631
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17000431 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCAGGATA GCATGTTGTG
  CATACATTTA CTTTAAAGTT GTGTGTTTTA CTACTGCAAA TTAAATTGTA AGTCAAACTA
  ACCAGGAAGA CACGTTGATT CTAAAACTTT GATCTGAAGA TTTTATTACT GCTTGGGTTT
  TTGAGGGGCA AGGTTATTAT ATTAGTCGAT TGGCTAGGCT ATGATGCTCA ATTTATTAGA
  Y
  CAGTGACTAA CCTAAGCCTT TCAGTGGAGA AACAATTTGA TGTGATTAAA ATTAAAAGAA
  AGAAAATAAA CTGTAGATGA ACCTGGACCA AATTCAATCA ACTGAAACTT TAAGAGAAAA
  AATAATAAGG TTCAACACAG GACAAGTAAA TCTACATCAG GACTACACCC CAGAAAACCT
  GCTTCCAACG CTGTGTGTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss133009733	ENSMUSSNP5359461	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C		T
ss321753154	CHEV_6_16950432	CHEVERUD	SCREENING_POP	f	SNP				T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs46460631					SNP	C	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17000431 () rs orientation: forward

Symbol	Name	Function Class
Gm67154	predicted gene, 67154	within coordinates
Rr626743	regulatory region 626743	401 bp distal
Rr626744	regulatory region 626744	881 bp distal