rs46436167 SNP Detail

Summary

• ID
  rs46436167
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:32582186 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCT CAAAAAGAAA AAAATCATTT
  A
  AAAAAATCTG GCCTGGGAGG CAAAG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss134750132	ENSMUSSNP1814117	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss320698373	CHEV_3_32426959	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46436167					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:32582186 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13058	CpG island 13058	1290 bp proximal
Gm66043	predicted gene, 66043	652 bp downstream
Mfn1	mitofusin 1	1428 bp upstream
Rr374786	regulatory region 374786	1128 bp downstream
Rr397636	regulatory region 397636	1215 bp upstream
Rr574980	regulatory region 574980	474 bp distal
Rr574981	regulatory region 574981	938 bp proximal
Rr574982	regulatory region 574982	1439 bp proximal
Rr574983	regulatory region 574983	1544 bp proximal
Tssr28756	transcription start site region 28756	1415 bp upstream
Tssr28757	transcription start site region 28757	1495 bp upstream
Tssr28758	transcription start site region 28758	1520 bp upstream
Tssr28759	transcription start site region 28759	1542 bp upstream
Tssr28760	transcription start site region 28760	1601 bp upstream