rs46430899 SNP Detail

Summary

• ID
  rs46430899
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:140475487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCGGA ATGTCGATGA TGTCACCCTC
  Y
  GCCAGGCCCA GCTCCCGCTT CAGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147711153	ENSMUSSNP2903046	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46430899					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140475487 () rs orientation: forward

Symbol	Name	Function Class
Gm69576	predicted gene, 69576	within coordinates
Padi4	peptidyl arginine deiminase, type IV	Coding-Synonymous
Rr603538	regulatory region 603538	41 bp distal
Rr603539	regulatory region 603539	262 bp distal
Rr603540	regulatory region 603540	42 bp distal