rs46411302 SNP Detail

Summary

• ID
  rs46411302
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:21823233 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CTGATGTCGC CCTACATAGT TTCCAAAGAA AAGGTAACAC
  AGAGGGTCCT TCGTTTGAAC AATCATAAAC AGAGTGAGGT TAATCTAATT TTGGAAAAGG
  C
  TAGGACAAGT GTGGTGGAAG AAACACCCCG GGGAGTCTCA TAACTACTCC GTGAGGGCAG
  AAATCCAAGC TCAGGTGAAT GTTGGCATGC TCTGGTCTCA C                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss133070145	ENSMUSSNP93393	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs46411302					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:21823233 () rs orientation: forward

Symbol	Name	Function Class
Rr627014	regulatory region 627014	within coordinates
Tspan12	tetraspanin 12	Intron