rs46409726 SNP Detail

Summary

• ID
  rs46409726
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141446580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAACAATGCG AGTCACCATG
  CTCAGCACCC CAACAAAAAC CTGAGACAGG TTCTTACCGC GCAGGCTCAG CTGTCCTGAG
  ACCTGAAATG GAGTCCAGGC TGGCCTTGAA CTCTCAGTCT CAAATATCAA ACAAAAACAA
  TCAAAACCAA ACTAACACTC AATGTGCAAG TTATCCCTGG GTTATGAGGA ATAAGTGAGC
  K
  GTGGCAGTCT TTATCCTTCT CTGTGTTACA ACCTTTCTAG CATAGCTATT CAGCATTTAC
  CAGAAAGAAA GAAAGAAAGA AAGAAAGAAA GAAAGAAAGA AAGAAAGAAA GAAACCAAAA
  AAACAAAAAA CAGGAAAGAA AAATACATAA GGAAATAAAC ACATCAAAAC TAGCCACCAC
  AGAAACTTCC ACTTTCCATG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147742659	ENSMUSSNP5715901	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46409726					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141446580 () rs orientation: forward

Symbol	Name	Function Class
Ddi2	DNA-damage inducible protein 2	Intron
Rr398662	regulatory region 398662	18 bp upstream
Rr603862	regulatory region 603862	825 bp proximal
Rr603863	regulatory region 603863	1453 bp proximal