rs46403322 SNP Detail

Summary

• ID
  rs46403322
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:121068898 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAGCGCCA GCCTACACAC
  CTGACTCTTA TGTTTGACAT CTTCCAGTGT AGAAAAACGT CAGTGAAAGG GTTAGCCTGG
  GCCGTTGGTT TAGAGGCTCA CAGTCACATA CATTTTCAGC ATCCTAAGGC ATCCACTGCT
  TTCCTGGGAC TAAACCCATG GAAGGCACCC CAGGACTGAG AGCTGTTACA CATGAGACCC
  M
  CAAGGACTCA CCCTGTCAGC ATATTAAACA GTTGTATTCT GAGGAAATTC AATTAAAACA
  CCAAAGAAAA ATGCTCGTAC ATTCACAGTG GAAGCTCGGC CAGCGCTGTG CTGGCAGCAA
  AGATGAGGTA AGAGGAAGCC AGGTAGGTCA GAGCGAGTTC TAGAGACCTG ACCCAGGAGT
  TCTAAGTCTG AGGTCCAGCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss61237530	NES16854892	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	A	C	C	C	A	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs46403322					SNP	C	C	C	C	A	C	C	C	A	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61237530	NES16854892	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121068898 () rs orientation: forward

Symbol	Name	Function Class
Rr688903	regulatory region 688903	1378 bp distal
Rr688904	regulatory region 688904	512 bp proximal
Rr688905	regulatory region 688905	636 bp proximal
Ulk4	unc-51-like kinase 4	Intron