rs46386886 SNP Detail

Summary

• ID
  rs46386886
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131590720 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTAG TGGTGGGTGA AATATCAGAT
  W
  CCCTGCATAT CAGATATCTA TATCA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss135905958	ENSMUSSNP2536807	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320967930	CHEV_3_131547923	CHEVERUD	SCREENING_POP	f	SNP		T	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs46386886					SNP	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131590720 () rs orientation: forward

Symbol	Name	Function Class
Gm65547	predicted gene, 65547	112 bp downstream
Rr585388	regulatory region 585388	1625 bp proximal
Rr585389	regulatory region 585389	1702 bp proximal