rs46374195 SNP Detail

Summary

• ID
  rs46374195
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138612031 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTAGG TCATTCTTTT TGTTTGTTTG
  R
  TTGTTTTGGT TGTTTTGTTT TGGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147659892	ENSMUSSNP2891923	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss321377822	CHEV_4_138440635	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46374195					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138612031 () rs orientation: forward

Symbol	Name	Function Class
Pla2g2e	phospholipase A2, group IIE	1906 bp downstream
Rr603039	regulatory region 603039	97 bp distal
Rr603040	regulatory region 603040	217 bp distal