rs46356577 SNP Detail

Summary

• ID
  rs46356577
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:98691489 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTCTTTACAG CTGCAAGAAG CAAACTTTTT TGTTTTTAAG
  CCACCCAGTG TACGGCAGTT TGTAACAGCA GCCCATGTGG ACCCAGCCAG AGGTTAAGTG
  G
  TTTCCACACA TCAGCAGCTG GAGGAGCTGA GGCTTGAAGC CAAGGTTCTG GCCACAGGGT
  CCATGGCTTT TACCCACAGG CCAGAGAGAT GAGAAGAGT                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147090473	ENSMUSSNP7173253	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46356577					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98691489 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kank4	KN motif and ankyrin repeat domains 4			Intron
				Noncoding-Transcript-Variant
Rr595790	regulatory region 595790			1197 bp distal
Rr595791	regulatory region 595791			793 bp proximal
Rr595792	regulatory region 595792			1952 bp proximal