rs46325879 SNP Detail

Summary

• ID
  rs46325879
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:87071113 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGA CTGAATTCTA AAGCAGGGTG
  C
  CACGCCCAGC CCCACCCCAG GGTCC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135454882	ENSMUSSNP6891869	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss320831185	CHEV_3_86967728	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46325879					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87071113 () rs orientation: forward

Symbol	Name	Function Class
Gm37855	predicted gene, 37855	1351 bp downstream
Kirrel1	kirre like nephrin family adhesion molecule 1	Intron
Rr2003	regulatory region 2003	1066 bp proximal
Rr579450	regulatory region 579450	52 bp distal
Rr579451	regulatory region 579451	356 bp proximal
Rr579452	regulatory region 579452	1319 bp proximal