rs46320066 SNP Detail

Summary

• ID
  rs46320066
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136641960 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATTT CTGTCACAGG CCCCTCCCAG
  M
  AGAGCCCCTT CCTGGGAGAG TCAGG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss147585122	ENSMUSSNP4855437	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss321359236	CHEV_4_136470564	CHEVERUD	SCREENING_POP	f	SNP		C	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs46320066					SNP	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136641960 () rs orientation: forward

Symbol	Name	Function Class
Gm69228	predicted gene, 69228	1682 bp upstream
Rr602498	regulatory region 602498	1495 bp distal
Rr602499	regulatory region 602499	471 bp distal
Rr602500	regulatory region 602500	94 bp proximal
Rr602501	regulatory region 602501	1742 bp proximal