rs46305059 SNP Detail

Summary

• ID
  rs46305059
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:66999227 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTACCAGT CTCCCACACG
  TTGCAGAAAG CAGCTGTGAT ATGATAGAAA TAATTCCTTC CTGTGCCCCA GAACCTACTT
  GGGAAACTAC TAACGTTCCT CTGGGATCAA GTAGAATTTC ATAAGAACAT AATGGATGTG
  AAGACCCTGA TGTTATGTAT GCGAAATTAT TATCTTCTGA TGGTCGTAAA TTTATTGTAA
  R
  AAGAGAACAT GCATTAACAT CAAGAACAAT AAATGCCATG TTGAGTGGCA TTTGCTGAGA
  ATGAAACCAA CGAGGTCAAT TTTAGATCCC TTCACATGTG CTATCAAAAA TGCATGTATT
  TTACCTACAA GGTCTGCTAT ACTAACAGCT CCACTGAAAT CCCTGAATTC CCAATTGCAC
  CTATAATTGC ACTGGAACTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60892198	NES15963823	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46305059					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60892198	NES15963823	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:66999227 () rs orientation: forward

Symbol	Name	Function Class
Gm29848	predicted gene, 29848	within coordinates
Gm53333	predicted gene, 53333	within coordinates
Gng12	guanine nucleotide binding protein (G protein), gamma 12	893 bp downstream
Tssr56879	transcription start site region 56879	1909 bp downstream