rs46287866 SNP Detail

Summary

• ID
  rs46287866
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:87071128 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGCA GGGTGACACG CCCAGCCCCA
  A
  CCCAGGGTCC CCCATCCCTG AAACC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135454885	ENSMUSSNP3755370	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss320831186	CHEV_3_86967743	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46287866					SNP	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87071128 () rs orientation: forward

Symbol	Name	Function Class
Gm37855	predicted gene, 37855	1366 bp downstream
Kirrel1	kirre like nephrin family adhesion molecule 1	Intron
Rr2003	regulatory region 2003	1051 bp proximal
Rr579450	regulatory region 579450	67 bp distal
Rr579451	regulatory region 579451	341 bp proximal
Rr579452	regulatory region 579452	1304 bp proximal