rs46267226 SNP Detail

Summary

• ID
  rs46267226
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:78691235 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GGGAGGCAGG CTGGGGCTGA AAGTGATTTA GACGCCGAGA
  GAGATTAATG GAGACCAAGA CACGTTTTCT GTTCAAGGCC CACGAGTTTA CTAAGAGACC
  R
  TGCTTATAAG GGGGAAGGCC CATCCCCCAT GCCAGTCCAC TCTTGGTGCC TGGAGCCATT
  CTGTCACCAG GCTGTTTGCT ATTCAGGAAT GTCTCAGGAA G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss148607019	ENSMUSSNP311055	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46267226					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:78691235 () rs orientation: forward

Symbol	Name	Function Class
Rr594151	regulatory region 594151	654 bp proximal
Tssr37651	transcription start site region 37651	692 bp upstream
Tssr37652	transcription start site region 37652	816 bp upstream
Tssr37653	transcription start site region 37653	1043 bp upstream