rs46263173 SNP Detail

Summary

• ID
  rs46263173
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:156606671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGAG AACTCTGGCA AGGCAGGGGC
  Y
  ATTCTGGGAA AAATAGGTAA CGCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss145804887	ENSMUSSNP4794072	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss320072743	CHEV_1_158709232	CHEVERUD	SCREENING_POP	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs46263173					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156606671 () rs orientation: forward

Symbol	Name	Function Class
Gm71086	predicted gene, 71086	within coordinates
Rr421254	regulatory region 421254	792 bp distal
Rr421255	regulatory region 421255	within coordinates