rs46256752 SNP Detail

Summary

• ID
  rs46256752
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:36583574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGTTTGTT GCTGGATTTT
  AATAAAATTA TATACAATAA TTATTTCAGT TGATTCATGA AAAATCACCA AATCAGTCCA
  AAAAATACAT TATGTTTGTT TAAACTGCTC AAGAGTCACA ATTAGCCCTT AGATGAGGGT
  GGTAGAGGCT CTTTTTCTGT GGATATCTCA AAATAGAGCA ACTCCCTGTC ATGTTGAATC
  R
  GAGAGCCTTC TCAATAACTT ACTTTACAGT CTGACCATGT CACATTGGAG AGATGTAGTC
  TAAATAAATC CAAAACAATC ATCAGGGAAT CTCGTTGGCT GGACTTGAAC ACACTGAAAT
  GTGCCAGGAT AAATGAATTG GCTGTTGCCT ACCAGTGAAG CACTTTGCAA ATTGCAAAGC
  ATTTTGTAAA TAGAAGTGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60877865	NES15971746	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46256752					SNP	G	G	G	G	G	G	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60877865	NES15971746	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:36583574 () rs orientation: forward

Symbol	Name	Function Class
Rr628549	regulatory region 628549	455 bp distal
Rr628550	regulatory region 628550	1686 bp proximal