rs46249136 SNP Detail

Summary

• ID
  rs46249136
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:142983750 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACTATGGT TGATGAATAC
  ATATGTAAAT TTCAGTGGAT TTATAATAAT CAAGGTGAGA TGGGAAGACA TAGAAAGAAA
  AGAAAAAATG AAGGGAAAAA GAAAAACAGC AACTCAGAAG AAAAAAAAAA GTATTAATCA
  TGTCACCCGA GGGTAGCCAG AACATCAAAT CCTGACTTGA TAATTAAAGG GAATAAATGA
  R
  AGAAGACCCC TCCTGTTCCA TGGGAACCGT AATTGCCATT GTTGAATATT CCTATTGGAC
  AGGGAAAGCC TGACGTCACA GGCAAATCCC ATCTGACAGA GCTGTAAGAG AAACAAAAGC
  ATTTCCTCAG ATTAGGCTGA CGCAGAGCTA TATAGTAACA GTAAAAATAA TGATAAATAA
  TAATAATGAT AACACAACAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147777697	ENSMUSSNP755841	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46249136					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142983750 () rs orientation: forward

Symbol	Name	Function Class
Rr604180	regulatory region 604180	1291 bp proximal
Rr604181	regulatory region 604181	1599 bp proximal