rs46247129 SNP Detail

Summary

• ID
  rs46247129
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148685858 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCACTCACA ACCAAATAGG
  CAAAGGGTGT TAGTGTTCCT CTTTATTCTC CTATTAAAGC AATCAGAGAA AGCACAACTA
  GCCCGGTATT TTATTCCCCA CCACAGAAGC CCAGGGTATC TTAACTCTAG GCTATAATTT
  CTATTTGTTG ACACAATGAA GTAGTTTTGT ATCGTATCCA TCTTTTTGTA AACATACACA
  R
  CCTATCAGTC TCCAGTGTGC CTTGTGTCGA TTCACAGGAA GCCTTCAGCA AGCACCTGGC
  AACGAATGGC TGGAACATGG GACCAGAATC CAGCACTACC AAAGGATAGT CCCAACAGCC
  ACAAGAAAAC TGAGGACTTT AGGAACGAAA ACAACTTTAA GGATCGAAAA ATGAGGAGGG
  CAAGGAAGAA GCTGGGGATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss136065916	ENSMUSSNP3653514	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss321017013	CHEV_3_148643186	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46247129					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148685858 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr587237	regulatory region 587237	1303 bp distal
Rr587238	regulatory region 587238	1533 bp distal
Rr587239	regulatory region 587239	1616 bp proximal