rs46242764 SNP Detail

Summary

• ID
  rs46242764
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:120869909 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAATGTACTA AACATTGTAC TTTGAATCAG TGAAGGAAGA
  AAAGATTCAT TAGTAAGTGG TCTGGAGACA TTAACTTACC ATGAAGTTAA CTTCCTATTA
  R
  ACCACATACA ATCCAGATGG ATCCAAACTG TAAGGGTAGG GGCTGGAGAG ATGACTCTGT
  CACTTAGAGT ACTCAGCTGC TCTTCTGGAG AACTCAGGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147376891	ENSMUSSNP153134	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss320481375	CHEV_2_120865164	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46242764					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:120869909 () rs orientation: forward

Symbol	Name	Function Class
Rr563765	regulatory region 563765	1866 bp distal
Rr563766	regulatory region 563766	156 bp proximal
Rr563767	regulatory region 563767	1764 bp proximal
Rr563768	regulatory region 563768	1844 bp proximal