rs46236282 SNP Detail

Summary

• ID
  rs46236282
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:3966370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAAATATG TACAGTGACC
  CAAATCAAGA ATTCTACATT GATAAATAGT TATTATCCAA TCTATATCAC ATTGGAGCTT
  GGCATCTGAC CCAGTAACAT CTTATACAGG ATTTTTTTTT TTTATGGTAA AAATCCAGTC
  CTGAGTCTGG GTTCTATGAG TCTTCAGTTT TGTCTCATCT AGGTGAGTCT CGAGTTTTTC
  R
  CCTTTCATGC CTGATGATTT TAAGAGTATA GACTACTTAT TTGTAGAAGT TCTCCCTAAT
  TTGGCCATCC CATTACTGCC TCATTACTGT AAGGCTTATG TTGTGTTGAG AGGAGCGCTG
  ATAAGGCTGC CATGTCCTCT GAATGTTGTA TCTGGAGATG TGTGATGTTG CAGATAAATG
  TACTTGTCAG TGCTATTCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss145944915	ENSMUSSNP2819134	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs46236282					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:3966370 () rs orientation: forward

Symbol	Name	Function Class
Rr588254	regulatory region 588254	991 bp proximal
Rr588255	regulatory region 588255	1344 bp proximal