rs46230967 SNP Detail

Summary

• ID
  rs46230967
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:70912737 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCGG GCTCACTTCA AACTCAGTAC
  R
  TAGGCAAGAC TGGCCTTGCA CACCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss146738575	ENSMUSSNP1097825	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss320335253	CHEV_2_70920450	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs46230967					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:70912737 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dcaf17	DDB1 and CUL4 associated factor 17			Intron
				mRNA-UTR
				Noncoding-Transcript-Variant
Rr558667	regulatory region 558667			1125 bp proximal
Tssr18238	transcription start site region 18238			1776 bp upstream