rs46228615 SNP Detail

Summary

• ID
  rs46228615
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:67394791 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATATGGTTA TTAGTTTAAG
  CATATTATGC CTATGAAGTA AAAAGGAAAA AGCAAAGAAC AATGAGTGGT GTGGTAGAGA
  ATTAAAGTGT TTGGGGTCTA AGAAGATAGG AAATCACTAT TCAAATAGGT CTTAAGGAAT
  GTTGCACTTT CTCCAGGACA TGTATCTTCT CCACACATTC ATGGAGGCAT CAGTTGTCCT
  K
  GCTGACTGTT AGAAAAGACT TGGAAAGTAT CAAATTATCT GGCTTGTAGT TTCCTGATGG
  TTAGAGGTTT TTTGCTTTTC CTTTGTCTTT TTCTCTCTCT TGTGACTGTG CAATGAAAAA
  AAAAAAAAAC TATTGAGTAA AAATGTAACA GTTTGCTTTT TTAGATTGTT GGAAAACACA
  TTGGATGCCT CAAAATGAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146469604	ENSMUSSNP1047541	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46228615					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:67394791 () rs orientation: forward

Symbol	Name	Function Class
Rr593794	regulatory region 593794	559 bp proximal
Rr593795	regulatory region 593795	1023 bp proximal