rs46225223 SNP Detail

Summary

• ID
  rs46225223
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:154265560 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACACGGCCC CATAAGCCTC
  CATTCCTACA TTGTCCCAAA ACTTTCCATT CTGACATGGT CCCCAACAGC CTCCAGCCCC
  ACAGAGCCCA AGTGAGCTGG TGCTATCTGA AGTTGAGCTA GGTTTGGTTC TCATGGCTGC
  CTGGCCTCTC CAAGAATCTT TTCCTCCAGG GGCCTTGTGG AGGAGTGTCC GGGGGGAGCC
  R
  CACGTAGCCC AGCCCTGTCT GCAGCCCAGG CAAGGGGATA AATATTTACG ATGGCCAGGC
  TCTAGTGCTC TATCGCTGCC AAATATTGTT CACACTGTGG TCAGTTTCTG TCCGGGCAAG
  TGGTTTCATG TCCTGCCAAG GTGGTATTTT GTAAGGCACT CCCAGAGTTT CTATGTGGAG
  AGTTTGTTCA GGAACACATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148099302	ENSMUSSNP1324246	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46225223					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154265560 () rs orientation: forward

Symbol	Name	Function Class
Megf6	multiple EGF-like-domains 6	Intron
Rr377451	regulatory region 377451	within coordinates
Rr606100	regulatory region 606100	within coordinates