rs46220803 SNP Detail

Summary

• ID
  rs46220803
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7829505 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCTGGTTG TAATCATGCA
  GCACATAGTC TTTTGAGATG TTTTTTTTTT TTTTTTTTTT TTTTTTTTTC TTAGTAGCAT
  GCCTGGAAGA CTCCATTGTA TCTTTTAGTA TCTTGGCATT TTTTTTTTTT TTTTTACTGT
  TGAATAGCAT TTGTACTGAT ACTGATATCA TTTCTCTGAC CAATTACCCA ACAGGAACAA
  Y
  CTAAGAAAGG AAAGGTTTAT TTGGACTCAT GGTCCCAGAG AAATTTCAAT CCGTTGTGAT
  AAACAAAGCA GGGTGGCAGA ATCCATTTGT GGGGATGGCA GGATATAGTA GGGACTCCTC
  ACATGGTGGT AAATCAGAAA ACATAGAAAA AATAGGTCAA AATCAGGGTG GTTATAACCT
  TCAAAGACCT ACCCCTTGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss132955705	ENSMUSSNP3896171	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs46220803					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7829505 () rs orientation: forward

Symbol	Name	Function Class
Rr626323	regulatory region 626323	1343 bp proximal