rs46219696 SNP Detail

Summary

• ID
  rs46219696
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102633300 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGTAATCTA GATTTGTAAA CCAAAGTAAA CCCTTTCTTT
  CCTAAGTTGT TTTTTTTTTC ACCAAGGTAT TTTATCCCAG CAACAGGAGT GAAATCAGAC
  M
  ACCCACTTAT AATTCACCTG TTTGTCTAAT GAGCAAATCT TGTTTTAGAG TCATTTTTAT
  CTATTTTGAT CACCTTGAAA TTTGTTTAAT GGTTTATTA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147124421	ENSMUSSNP977138	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46219696					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102633300 () rs orientation: forward

Symbol	Name	Function Class
Rr561739	regulatory region 561739	1000 bp proximal
Rr561740	regulatory region 561740	1093 bp proximal
Rr561741	regulatory region 561741	1186 bp proximal
Rr561742	regulatory region 561742	1284 bp proximal