rs46217385 SNP Detail

Summary

• ID
  rs46217385
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147517226 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TCTAGCTAGA TAATGTACCA GGCTCCCACA GAATGGAGGA
  GTGGAGCTGA TGGGGTTCAT GGATTTAGTG TAGGGGGTGT GTGGGTGCCT TGTCTAGGGA
  T
  GGGCAAGAGC TCTGAGACAG GGAGACCTTT AATTCCAGGA CAATCTGTGC TGTTTAGGGA
  AGTCTATTAA AAAAAAAAAA AAAAACAAAG CAAGGCAAAG T                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147960161	ENSMUSSNP2393534	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs46217385					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147517226 () rs orientation: forward

Symbol	Name	Function Class
Rr398817	regulatory region 398817	1479 bp downstream
Rr398818	regulatory region 398818	1132 bp upstream
Rr398819	regulatory region 398819	1531 bp upstream
Rr604487	regulatory region 604487	214 bp distal