rs46196506 SNP Detail

Summary

• ID
  rs46196506
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:71788991 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCACCCCGAC CCCCAAATTA AATAAATAAA ATGTAATATA
  TATAATGTAG AAGGAGTCTA GGGATAGAGC TCAGTTAGCT GAGCGCTTCA CTAATATGCA
  Y
  ACTGCTCTGG GTTCAACCCC TAGTTCCTTA TAAACCAGAT ATGGTGGAAC ACAATCTGCA
  ATGCTAGCAT TCAGGGGGAT TAGAACCTCA AGGGAACTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss133277414	ENSMUSSNP1255979	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
ss321818417	CHEV_6_71762001	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46196506					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71788991 () rs orientation: forward

Symbol	Name	Function Class
Mrpl35	mitochondrial ribosomal protein L35	990 bp downstream
Reep1	receptor accessory protein 1	1297 bp downstream
Rr632010	regulatory region 632010	971 bp proximal