rs46188045 SNP Detail

Summary

• ID
  rs46188045
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146046664 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCCAGGAC ATTTTCGGCT
  TTACAGGTTG AGTCAGAACT GAGCCAGTGA ACGACTTTAT TTTTTTCTCA TTCGGCAATT
  TACATTTAGA AAGGAAAAAG GGTTATTAGC TCTCAAGCTG TATGAAATAT GAGACTGGAT
  TTCAGCCTGC AGGCAGACTT TCGAAGTCTC TGCACAGCGT CCCCGTAGAC AGCCATTAGG
  R
  CTTTGCTTAA AAACCTGAAG TGGTCAGAAG CTGTCTTTCA AAGTCACCAG CTCCATCTAA
  GCGCACCTTA AATTGCTAGA AAGTACTTTT ATGTTGGCTT GGAATTTGCC TACTTCATCT
  TACTACCAAG GCATTCTTTA AGTGCTGATT AAACTTCTAG AAATGTCTGT TGGTGGAAAC
  AGTTTTCTAT GACCTGTCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss136043361	ENSMUSSNP1232675	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss321009996	CHEV_3_146003873	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46188045					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146046664 () rs orientation: forward

Symbol	Name	Function Class
Rr587006	regulatory region 587006	439 bp distal
Rr587007	regulatory region 587007	1086 bp proximal