rs46173556 SNP Detail

Summary

• ID
  rs46173556
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:39691355 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAGAGAAA GGGAAATCAC
  CCATGCAACA AACTAGTCCC TAGACCATAT TAGCTTAAAC ATTCTAAGTC CAGTGTATTC
  TGCTCCTCCT ATACCATGGC TCAAACAGAG CAGAAGACCA GAAGGTCCTT GGATCTACAG
  ATTTAAGACA AGCTTTCCTC CATCCAAAGA ATTATCTCCC ATCCAAATGC TTTACAGTCA
  Y
  CTGAAAAATT ATTACTTAGC CAACAGATCC ATAAGAAAGC CAGGTGTTAA AGGATCGGGT
  CTCAGTGGGG GACCCATGAC ATGGTGGGCT GCATGGCTCC ATTCTTCACT CCAGTACTGT
  CTGCCATCAG TGCCGAGACC CGCTGCAATT GGTTCTCCAT AGACCACATT TCCTGGAAGG
  TTCAAAGGCA GGATTCAGTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss63483406	NES16999811	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46173556					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63483406	NES16999811	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:39691355 () rs orientation: forward

Symbol	Name	Function Class
Dpys	dihydropyrimidinase	Intron
Rr501538	regulatory region 501538	710 bp proximal