rs46170465 SNP Detail

Summary

• ID
  rs46170465
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:133224010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACATGGTG CATGTAAGGA
  GTCAAAGCAA ATGGAACACT GGGTCTGATG ACCCAACTCA CCTTAAACTG CAAGAAGTCG
  AGTCAACTCC CACATCCCAG GTGGAGGAAA CAGGAGCCCT GATAAGGAAG GAAACAGAAG
  CCCAGATAAG GCTCCTTGAA TTTCTGGTCT GTGTCTGACT GGTGTGAAGT AAGGAATTTC
  R
  GGATCCCTGG TATTAGAATC AACCCCCCCC CCCTTTTCTG TAACCACGCT GGCAGGATTC
  TGAAATGGGG AGAGTGAGTG CACCAAGGGT ATGGAGAAAT TTTTCTAGGG TGTCTGAAGC
  TGTCCAGGTG TGGGTGGGTG GCGTCACATT CAAATTTACA AACCTTTCAT GGTGCCTAAT
  GGCTTGTAAG ATCAAGTTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147626253	ENSMUSSNP31987	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46170465					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:133224010 () rs orientation: forward

Symbol	Name	Function Class
Rr565593	regulatory region 565593	770 bp distal
Rr565594	regulatory region 565594	868 bp distal
Rr565595	regulatory region 565595	750 bp proximal