rs46156800 SNP Detail

Summary

• ID
  rs46156800
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147603875 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TCTCCATGTC CAATGAGTTC TCTGGATGGC ATGCTTGGTA
  ATGGAGAACT GCTTTCAATT TCTACAGAAC AAAGAGTTAT CTTAGCAAGC GTCTAGATTG
  C
  TTGTGGATCC AAGGGACCCA CTTAGCCAAA AACTCAAATA AAACCCAGGT AGTGTACTAG
  AAAGCTCATT TGAAGGAAAT ACCAGGTCAG TTGGGACTTA T                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147966880	ENSMUSSNP5756610	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs46156800					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147603875 () rs orientation: forward

Symbol	Name	Function Class
Gm15951	predicted gene 15951	1050 bp downstream
Gm69897	predicted gene, 69897	within coordinates
Rr398830	regulatory region 398830	215 bp upstream
Rr604494	regulatory region 604494	within coordinates
Rr604495	regulatory region 604495	674 bp proximal