rs46145789 SNP Detail

Summary

• ID
  rs46145789
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:67394942 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAGGACAT GTATCTTCTC
  CACACATTCA TGGAGGCATC AGTTGTCCTG GCTGACTGTT AGAAAAGACT TGGAAAGTAT
  CAAATTATCT GGCTTGTAGT TTCCTGATGG TTAGAGGTTT TTTGCTTTTC CTTTGTCTTT
  TTCTCTCTCT TGTGACTGTG CAATGAAAAA AAAAAAAAAC TATTGAGTAA AAATGTAACA
  R
  TTTGCTTTTT TAGATTGTTG GAAAACACAT TGGATGCCTC AAAATGAAAA AAAAGGCATT
  CTGTCATTGT GTTCCACAAG TCTCACATAA GAGCAGAAAA CCTCGAACTT ATCCATATTC
  ACTTGTGAAA CTTAAGTATG TTCAGTTTTT TGCAACCGTC CCAGCCCATC ACTTCCTATC
  ATGGTACCGA CCTCTTTTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146469616	ENSMUSSNP6694126	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46145789					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:67394942 () rs orientation: forward

Symbol	Name	Function Class
Rr593794	regulatory region 593794	408 bp proximal
Rr593795	regulatory region 593795	872 bp proximal