rs46130360 SNP Detail

Summary

• ID
  rs46130360
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19400427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATGGAACC TGGAAAATTC
  TCACTCATCT GAAGTTAGGA TACTTTATGC TACAAGATAA TTTTAGCAGG AGAATCTGTT
  GCATAGCATT TGCTTTCTCA GGACTGTGCC AATAGTGCTT TCATTTCAAG GACTTTTCCC
  AGGAATTCCT GCCTTCAGTT GTCTGGGCAC CCCCTTACTT CTTTTTTCCA ACACCTTTCT
  Y
  CCCCTCACTA GATTTCATTT ATTTTGTTGC TTAATTTTTC CCCAAGTCTT TTTTTAAAAT
  AATATTTCCC TAAAATTTCG CTCAGAGTTT CAGTTTACCA ATCACAAAAA TTCCTTGTTC
  TTTGACTGCT TCATTTTTTT TTTTTTCAGT TAAACTCTGG AGAGCGGGCA CCTTAGTTAT
  TTCCATCTGT CATGTTGATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134667092	ENSMUSSNP6625241	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46130360					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19400427 () rs orientation: forward

Symbol	Name	Function Class
Rr573976	regulatory region 573976	1982 bp proximal