rs46113385 SNP Detail

Summary

• ID
  rs46113385
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:38665055 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTTTTAGA CAGTGCTCAC
  GTGCGTGGGC AAAAACTCCA GTATTGTATT TGTGACTAAT TATATAACAT GTTATTTAAC
  ATGTTTTCTG TTCTGTGTAA AGTGTAAAGC ATTCCAACAA AAGGTTTTTC TGTAGATTTT
  TTTCATTCAT GCTGTTGATT GCTAAGTGTA GTAATAGACT GATCATGATG CTGAATAAAG
  R
  TGTGTCTTTT TTGTAAGGTG CTGTGTAAAT TTAGGCTACC GTGAAGCAAT CTTGGTAAAC
  TTTTCAACAG TGTGGAGTTA GAATCCCTTC ACAGTGGTGC TAAGTACAAT TTGGAAAATA
  TTTCTGGTTG CTTGGGTGGA AAGGCCATTG TCTTCAGAAA ACCTCAGAGT TGTTAAACCA
  CCAGTTACCA TTTTGACTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146203219	ENSMUSSNP3779784	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
ss321088824	CHEV_4_38612088	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46113385					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:38665055 () rs orientation: forward

Symbol	Name	Function Class
Gm12381	predicted gene 12381	within coordinates
Gm12382	predicted gene 12382	325 bp downstream