rs46104329 SNP Detail

Summary

• ID
  rs46104329
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:163553158 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCCAACTA AGCTTAGAAA
  TGACACAAAT GGCAAAAGAG CTGGGGAGAA GCGTGCCTGG CCTCTAAGAG ATCTATCAAG
  ACTTCTGCTT CTTCCCAGTG GCCCCTTAGA ACCACGGATG GTAGCCCCTA CCCACAGAAG
  TCACAGTATG CTGGGTAGAG CATAGTCGCT AAGAGGGTGG GGCTTTAAAA TTGATATCCC
  M
  AATTGTTGGT TTTTTTCCTA TTGCTGTGGA TTAGGAATTT TGAGGTAGGT GGGGTAAGGA
  GGGGCTGATA TTTGGGATGT AAAGTGAATT GAATAAATTA AAAATTTTTG AGGCAAATTC
  ATAGACTCAA CCAAACATCA GCGAAAAGAC TGAAGAATTT GATCTCCAGC ACAAAATCCA
  ATGAAGAGGA TTAGCACGAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss148209688	ENSMUSSNP2927916	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46104329					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163553158 () rs orientation: forward

Symbol	Name	Function Class
Pkig	protein kinase inhibitor, gamma	Intron
Rr569473	regulatory region 569473	155 bp distal
Rr569474	regulatory region 569474	1139 bp proximal