rs46094237 SNP Detail

Summary

• ID
  rs46094237
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:133962914 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGAAAAGC TAAAAGAACA
  CCAGGTTCCT TCTTCCGGCT TACACATGCA TGCATAGCTG TGTGCACGTG TGTGTGTGTG
  TGTGTGTGTG TCCTCCCCAC AACACACACA AATAAATACA TATAAATAAG GAAATATTTT
  TCTTCTTTTA TAGCACATCG GGAGAAATGG CTCAGAGATT AAGGGCACTT CCTGCTTTCC
  M
  GGAGGACCGG AGTTCGCTTC CCAGCCCCCA TATCAGGGGT TTCACAACTG TGTTAGCTCT
  AGCTCCATGA GATCTGCCCC CCTTCTTCTG GCCTCTCAGG GCATCTGTAC AGGCACACTG
  ATACATACAT AAAAATAAAA ATAAAAATAA AGTAATTTTT AAAAAATGGT GAGGGGAGGA
  AGCTTTTCAG GGCTTCCTGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss133768825	ENSMUSSNP6671451	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss321975820	CHEV_6_133935969	CHEVERUD	SCREENING_POP	f	SNP			C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46094237					SNP	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:133962914 () rs orientation: forward

Symbol	Name	Function Class
D6Mit290	DNA segment, Chr 6, Massachusetts Institute of Technology 290	513 bp proximal
Rr380154	regulatory region 380154	689 bp upstream
Rr639549	regulatory region 639549	595 bp distal