rs46086437 SNP Detail

Summary

• ID
  rs46086437
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:139662780 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATGAGTTCT GTGTTAAGAG GAGCACAGGC AGAGGCGATG
  AAGAGGAATT CGCTATTCTC GTTTAGAGAC AGTAATTTGA GAAGGATTAA TTAGGTGTCA
  Y
  GGTGACACAT CAGAAGGGAA CCTGGAGTTT AGGGGCAGGT TCCAGTCCAT GCTGGAGATT
  TTGGAGACAC AAGGTTTAAC TATCAGGCTT AAGAAGATC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147665499	ENSMUSSNP95003	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46086437					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:139662780 () rs orientation: forward

Symbol	Name	Function Class
Rr566053	regulatory region 566053	547 bp proximal