rs46077557 SNP Detail

Summary

• ID
  rs46077557
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172599111 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGTC TGTTTGAAAA GGTGACCCCC
  A
  ACCCCCACCC ATAGGATGAC CACTG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148322295	ENSMUSSNP3257431	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss320620078	CHEV_2_172582819	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46077557					SNP	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172599111 () rs orientation: forward

Symbol	Name	Function Class
Gm74644	predicted gene, 74644	1202 bp downstream
Rr571720	regulatory region 571720	124 bp distal
Rr571721	regulatory region 571721	within coordinates
Rr571722	regulatory region 571722	902 bp proximal
Rr571723	regulatory region 571723	1385 bp proximal